CDS

Accession Number TCMCG016C09989
gbkey CDS
Protein Id OMO84700.1
Location complement(join(44241..44324,44774..44839,45135..45193,45323..45410,45648..45830,45912..46079,46233..46376))
Organism Corchorus capsularis
locus_tag CCACVL1_10705

Protein

Length 263aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009698.1
Definition hypothetical protein CCACVL1_10705 [Corchorus capsularis]
Locus_tag CCACVL1_10705

EGGNOG-MAPPER Annotation

COG_category A
Description U11 U12 small nuclear ribonucleoprotein 65 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13157        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010229        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030626        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097157        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTTGCCAACGCCGCCTCTACCGCCTCCAATACCTGCACCACAGCCACCACCCCCACCCCCACCACCTGCTTCCTTACCTGCAAAGCCTAATTTGGTAGATGCATCTTCTAGTGAATCAGAAATGGAGTCTTCAGATGAGGTAAATGAAAAAGGTGTGGCAAAACCTGCACGGAAGCATGCCAAGCGAGAAGCTATTTTAGGCCCTGCAATTGATAAAAGCGTGGCTCATGAGGCTGTTGGAGTGAAACCTGCCACCTTGATCCCAAAAGAAATCCCATTGATAAAAAAGAAGAACCCTCTATTACAGATCAATATTGCCCCCAAACAGATTCCTAATGAACAGAAAGATGATGATGATGATCACGACTTGAAACAGATTTCAGAGGAACCTAATGAGGAGGATTCAGATGCTAAACGATTTGCTACTGCAGATGAGTTGGAAAAAGGAAAGTTGCCTCCAGAAGAAATCTTATCACTTCCAATGTTTAAGAATTATACAGCTGGGAATCCTGCTTCTGTGTTGTATATAAAGAACTTGGCAAAGGATGTTCTTCCTGAAGATTTCTATTTCATCTTTGGATCATTATTTGGAAGCATTGATGCAGCTAAATCCAGTCTTAATGTGAAGCTAATGCAGGAGGGAAGGATGAGGGGCCAGGCTTTTGTGACATTTCCATCAGTTGAACTTGCCCATCGTGCTTTGAACCTAGTAAATGGGTATGTGTTCAAAGGCAAACCAATAATCATCCAGTTTGGTCGGAATCCTGCCGCTGCAAAGACAACCTAA
Protein:  
MALPTPPLPPPIPAPQPPPPPPPPASLPAKPNLVDASSSESEMESSDEVNEKGVAKPARKHAKREAILGPAIDKSVAHEAVGVKPATLIPKEIPLIKKKNPLLQINIAPKQIPNEQKDDDDDHDLKQISEEPNEEDSDAKRFATADELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVLPEDFYFIFGSLFGSIDAAKSSLNVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPIIIQFGRNPAAAKTT